CDS

Accession Number TCMCG035C39351
gbkey CDS
Protein Id XP_021599582.1
Location join(18960303..18960406,18960493..18960637,18960730..18960804,18961135..18961224,18961449..18961528,18961968..18962037,18962150..18962235,18962534..18962600,18962739..18962834,18963747..18963849,18964302..18964348,18964433..18964516,18964609..18964662,18965225..18965325,18966963..18967053,18967568..18967732,18968587..18968676,18968946..18969014,18969591..18969689,18969846..18969932,18970057..18970110,18970244..18970323,18971548..18971695)
Gene LOC110605369
GeneID 110605369
Organism Manihot esculenta

Protein

Length 694aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394209
db_source XM_021743890.1
Definition probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Manihot esculenta]

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13117        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGCAGTTTTGGAAACCCGGTGCTGAGAAGCCTCGCATCCTCGACGACGAGGAAGGCGGCGTCCTTTTTCTCGCTTCCTCCCTATCCTCCTCTTCATCCGGATATGGATATGGTAGCATTGAAAAGCAGAGGTTGAGATTGCCTGTCTACAAGTACAGAACGGCGATTCTGTATCTGGTGGAGACTCATGCCACTACCATTATTGTTGGCGAGACTGGTAGCGGCAAAACCACACAGATTCCGCAGTACCTTAAAGAGGCAGGTTGGGCTGATGGTGGGCGCGTCATAGCTTGCACCCAACCGAGACGATTGGCAGTCCAGGCAGTTGCTTCAAGGGTGGCTGAAGAGATGGGGGTCAAGCTTGGAGAGGAAGTTGGCTATACAATTCGATTTGAGGATCTTACTAATTCAGGTGTAACCATGATAAAGTTTCTTACAGACGGGGTTTTACTCAGAGAAATGATGGATGATCCACTTTTGACCAAGTACAGTGTCATAATGGTAGATGAGGCTCATGAAAGGTCTATTTCGACTGACATTTTGCTGGGTCTGCTGAAAAAGATCCAGCGCCGTCGACCTGAGTTGCGTTTAATTATTTCATCTGCTACAATTGAAGCCAAATCAATGTCTGCTTTCTTCCAGACCAGCAAAAGGCATCAAGGACTTGAAGCAGATGATGGTCCAAGGAAAGATCCAGCAATTCTATCAGTTGAGGGTAGGGGGTTTAACGTACAAATTCATTATGTTGAGGAACCTGTTGCAGATTATGTTCGGGCTGCTGTTTCTACAGTCTTGTCAATTCATGATCAGGAACCTCCAGGTGATATTCTGGTATTTCTTACTGGTCAAGATGATATAGATGCGACTGTTCAGCTGCTTACTGAAGAAGCTCAAGCCAATGGAAAGAATAAAGGATTGATTGTTCTGCCTTTGTACTCGGGGCTCTCACGTGCGGAGCAGGATCTGGTGTTTTCTCCCACTCCTAGAGGGAAGAGGAAAATAGTAATATCAACCAATATTGCTGAGACTTCTTTGACTTTGGAGGGAATCGTCTATGTTGTTGACTGTGGATTCTCAAAACAACGGTTCTACAATCCGATCTCAGATGTTGAAAATCTAGTAGTGGCACCCATATCCAAGGCATCTGCTAGACAAAGGGCTGGTAGGGCTGGAAGAATTCGACCTGGGAAGTGTTACAGGCTTTATACTGAAGAATACTTTGTCAATGAAATGCCTGCTCAGGGGATCCCTGAGATGCAGAGGTCAAATCTTGTTTCATGTGTGACCCAGTTAAAAGCTTTGGGCATAGACAATATATTAGGCTTTGATTGGCCAGCATCTCCAGCTCCTGAAGCAATGATCCGAGCACTTGAAGTCCTTTATTCGTTAGGAGTCCTTGATGATGATGCTAAACTTACTTCACCGGTTGGGTTTCAAGTAGCAGAGATCCCACTAGACCCAATGATTGCAAAAATGATATTATCTTCAAGCCAACTTGGATGTTCAGAGGAAATCATTACCATTGCTGCTGTTCTCTCCATCCAGTCTATTTGGGTTTCTACTAAATTACAAAAGGAACTAGATGAAGCTAAGTTGAGATTTGCAGCTGTTGAGGGTGATCATGTTACATTCTTAAATGTTTACCAAGGTTTCCTTCGATCTGGAAAATCTTCGCAGTGGTGTCATAGAAACTTTGTCAATTACCATGCTATGAAAAAGGTTATTGAAATTAGAGAACAGCTGAGGAGAATAGCACTGAGGATAGGCATTGTCTTAAAATCATGTGAAAGAGATATGCTGGTAGTAAGAAAGGCTGTAACTGCTGGCTTTTTTGCAAATGCATGCAATTTAGAAGCATACAGTCATAATGGGATGTACAAGACTGTTAGAGGTTCTCAAGAAGTGTATATTCACCCTTCATCTGTGTTATTCAGAGTAAATCCCAAGTGGGTCATTTACCATTCTCTCGTCTCCACTGATCGACAATACATTAGAAATGTAATGACCATGGATCCGTCTTGGCTAACGGAAGCTGCACCACATTTTTTCCAGTATCAAAGACCAGATCCTATTGGTCACTGA
Protein:  
MSQFWKPGAEKPRILDDEEGGVLFLASSLSSSSSGYGYGSIEKQRLRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKLGEEVGYTIRFEDLTNSGVTMIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKSMSAFFQTSKRHQGLEADDGPRKDPAILSVEGRGFNVQIHYVEEPVADYVRAAVSTVLSIHDQEPPGDILVFLTGQDDIDATVQLLTEEAQANGKNKGLIVLPLYSGLSRAEQDLVFSPTPRGKRKIVISTNIAETSLTLEGIVYVVDCGFSKQRFYNPISDVENLVVAPISKASARQRAGRAGRIRPGKCYRLYTEEYFVNEMPAQGIPEMQRSNLVSCVTQLKALGIDNILGFDWPASPAPEAMIRALEVLYSLGVLDDDAKLTSPVGFQVAEIPLDPMIAKMILSSSQLGCSEEIITIAAVLSIQSIWVSTKLQKELDEAKLRFAAVEGDHVTFLNVYQGFLRSGKSSQWCHRNFVNYHAMKKVIEIREQLRRIALRIGIVLKSCERDMLVVRKAVTAGFFANACNLEAYSHNGMYKTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYIRNVMTMDPSWLTEAAPHFFQYQRPDPIGH